I’d like to see a couple of things:
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Ladies. Even though they were perhaps not as much to be seen as Knights Templar, they did exist and did interact and inform events. Even in the middle ages. Examples: Jeanne d’Arc, the alleged female Pope in the 11th century, thieves no doubt by the gallows-full… they deserve more prominence than a simple prequel.
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Thievery. I hope things are as open and accessible to thieves as certain other games have made it in the past, such as the early Elder Scrolls games, and elements of the Thief series as well as Deus Ex.